LASSI (Likelhood-based Approach for Selective Sweep Inference)
A Python script that implements the likelihood ratio T statistic of Harris and DeGiorgio (2020) for detecting selective sweeps and inferring their softness.

Data associated with this Harris and DeGiorgio (2020).
[Link]

Please cite the following manuscript if using this software:
AM Harris, M DeGiorgio (2020) A likelihood approach for uncovering selective sweep signatures from haplotype data. Molecular Biology and Evolution doi.org/10.1093/molbev/msaa115.

[Click to download manual]
[Click to download software]

On a UNIX system, extract the compressed files using the command
tar -xzvf LASSI_program_071019.tar.gz
Change directory to LASSI_program_071019 using a command such as
cd LASSI_program_071019
The LASSI_iterator.py script will be located in the LASSI_program_071019 directory

Software history
June 20, 2019 - Uploaded version 1.0 of the software and manual
July 10, 2019 - Made minor update to package